diff --git a/flake.nix b/flake.nix
index 2260d4b..983a667 100644
--- a/flake.nix
+++ b/flake.nix
@@ -92,7 +92,10 @@
                                         "/var/log"
                                         "/var/lib/bluetooth"
                                         "/var/lib/networkmanager"
+                                        "/var/lib/nixos"
                                         "/etc/ssh"
+                                        "/var/lib/systemd/coredump"
+                                        "/etc/NetworkManager/system-connections"
                                     ];
                                     files = [
                                         "/etc/machine-id"
@@ -203,7 +206,7 @@
                                         else
                                             echo "Local repository found so cloning from there"
                                             ${pkgs.git}/bin/git clone -b main "$DOTFILES_GIT_DIR" "$TEMP_DIR"
-                                            ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$TEMP_DIR" pull --rebase
+                                            ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$TEMP_DIR" pull --rebase || true
                                         fi
 
                                         echo "Copying dot files to home"
@@ -212,7 +215,7 @@
                                         NVIM_DIR="$HOME/.config/nvim"
                                         echo "Neovim config not initialised so initialising from remote"
                                         ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$HOME" submodule set-url ".config/nvim" https://labs.scarif.space/chris/nvim.git
-                                        ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$HOME" submodule update --init
+                                        ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$HOME" submodule update --init || true
                                         ${pkgs.git}/bin/git --git-dir="$DOTFILES_GIT_DIR" --work-tree="$HOME" submodule set-url ".config/nvim" git@labs.scarif.space:chris/nvim.git
 
                                         cd "$HOME"